SEQUENCE LISTING
<110> John, Smith
<120> Example of a Sequence Listing
<130> 11-00001
<140> EPT/EP2011/000001
<141> 2011-01-01
<150> US 0001/1
<151> 2010-03-17
<160> 8
<170> BiSSAP 1.0
<210> 1
<211> 227
<212> DNA
<213> Homo sapiens
<220>
<221> source
<222> 1..227
<223> /mol_type="DNA"
/organism="Homo sapiens"
<400> 1
atgttggggg cccgcctcag gctctgggtc tgtgccttgt gcagcgtctg cagcatgagc 60
gtcctcagag cctatcccaa tgcctcccca ctgctcggct ccagctgggg tggcctgatc 120
cacctgtaca cagccacagc caggaacagc taccacctgc agatccacaa gaatggccat 180
gtggatggcg caccccatca gaccatctac agtgccctga tgatcag 227
<210> 2
<211> 70
<212> DNA
<213> Artificial Sequence
<220>
<221> source
<222> 1..70
<223> /mol_type="DNA"
/note="primer"
/organism="Artificial Sequence"
<400> 2
ggggacaagt ttgtacaaaa aagcaggcta ggaggaatta accatgaaca gccaaatcac 60
caacgccaag 70
<210> 3
<211> 240
<212> DNA
<213> Paramecium aurelia
<220>
<221> source
<222> 1..240
<223> /mol_type="DNA"
/organism="Paramecium aurelia"
<220>
<221> CDS
<222> 52..123
<400> 3
agctgtagtc attcctgtgt cctcttctct ctgggcttct caccctgcta atcagatctc 60
agggagagtg tcttgaccct cctctgcctt tgcagcttca caggcaggca ggcaggcagc 120
tgatgtggca attgctggca gtgccacagg cttttcagcc aggcttaggg tgggtccgcc 180
gcggcgcggc ggcccctctc gcgctcctct cgcgcctctc tctcgctctc ctctcgctcg 240
<210> 4
<211> 23
<212> PRT
<213> Paramecium aurelia
<220>
<221> SOURCE
<222> 1..23
<223> /mol_type="protein"
/note="[CDS]:52..123 from SEQ ID NO 3"
/organism="Paramecium aurelia"
<400> 4
Ser Asp Leu Arg Glu Ser Val Leu Thr Leu Leu Cys Leu Cys Ser Phe
1 5 10 15
Thr Gly Arg Gln Ala Gly Ser
20
<210> 5
<400> 5
000
<210> 6
<211> 251
<212> PRT
<213> Homo sapiens
<220>
<221> SOURCE
<222> 1..251
<223> /mol_type="protein"
/organism="Homo sapiens"
<220>
<221> VARIANT
<222> 64
<223> Val
<400> 6
Met Leu Gly Ala Arg Leu Arg Leu Trp Val Cys Ala Leu Cys Ser Val
1 5 10 15
Cys Ser Met Ser Val Leu Arg Ala Tyr Pro Asn Ala Ser Pro Leu Leu
20 25 30
Gly Ser Ser Trp Gly Gly Leu Ile His Leu Tyr Thr Ala Thr Ala Arg
35 40 45
Asn Ser Tyr His Leu Gln Ile His Lys Asn Gly His Val Asp Gly Ala
50 55 60
Pro His Gln Thr Ile Tyr Ser Ala Leu Met Ile Arg Ser Glu Asp Ala
65 70 75 80
Gly Phe Val Val Ile Thr Gly Val Met Ser Arg Arg Tyr Leu Cys Met
85 90 95
Asp Phe Arg Gly Asn Ile Phe Gly Ser His Tyr Phe Asp Pro Glu Asn
100 105 110
Cys Arg Phe Gln His Gln Thr Leu Glu Asn Gly Tyr Asp Val Tyr His
115 120 125
Ser Pro Gln Tyr His Phe Leu Val Ser Leu Gly Arg Ala Lys Arg Ala
130 135 140
Phe Leu Pro Gly Met Asn Pro Pro Pro Tyr Ser Gln Phe Leu Ser Arg
145 150 155 160
Arg Asn Glu Ile Pro Leu Ile His Phe Asn Thr Pro Ile Pro Arg Arg
165 170 175
His Thr Arg Ser Ala Glu Asp Asp Ser Glu Arg Asp Pro Leu Asn Val
180 185 190
Leu Lys Pro Arg Ala Arg Met Thr Pro Ala Pro Ala Ser Cys Ser Gln
195 200 205
Glu Leu Pro Ser Ala Glu Asp Asn Ser Pro Met Ala Ser Asp Pro Leu
210 215 220
Gly Val Val Arg Gly Gly Arg Val Asn Thr His Ala Gly Gly Thr Gly
225 230 235 240
Pro Glu Gly Cys Arg Pro Phe Ala Lys Phe Ile
245 250
<210> 7
<211> 886
<212> RNA
<213> Mus musculus
<220>
<221> source
<222> 1..886
<223> /mol_type="RNA"
/note="mRNA for ubiquitin conjugating enzyme (Ubc25 gene), Ubc252
aallele"
/organism="Mus musculus"
<220>
<221> CDS
<222> 172..795
<223> /allele="Ubc252a"
<220>
<221> variation
<222> 459
<223> /allele="Ubc252b"
/frequency=".4"
/replace="a"
<220>
<221> variation
<222> 511..512
<223> /allele="Ubc252c"
/replace="agctagcgagctagacgatcgatcggcgggggcctctatcgatt"
<220>
<221> variation
<222> 790..798
<223> /replace=""
/standard_name="Ubc252d variant"
<400> 7
gggccggagc cucggcggcg gcuucuuuuc ccgccccccc ggugcccccc ccaggcugcc 60
uccauuuccu caaggaaggu uccucggcgc ucucccuccc ccacagcgua gcggcgcacg 120
agcgggccgg gcgggcggcc gagaaguuuu cccagagaua aguucaccaa gauguccagu 180
gacaggcaaa ggucggauga ugagagcccu agcaccagca guggcaguuc agaugcagau 240
cagcgagacc cugccgcucc aaagcccgag gaacaggaag aaagaaaacc uucugccacc 300
cagcagaaga aaaacaccaa acucucuagc aaaacgacug cuaaguuauc cacuagugcu 360
aaaagaauuc agaaggagcu agcagagaua acccuugauc cuccuccuaa cugcagugcu 420
gggccuaaag gagauaacau uuaugaaugg aggucaacua uacuuggucc accagguucu 480
guauaugaag gugguguuuu uuuucuggau aucacauuuu cuucagauua uccauuuaag 540
ccaccaaagg uuacuuuccg uaccagaauc uaucacugca acaucaacag ucagggaguc 600
aucugccugg auauucugaa agacaacugg aguccugcuu ugacuauuuc aaagguuuug 660
cucucuauuu guucccuuuu gacagauugc aacccugcgg auccucuggu cggaagcaua 720
gccacucagu auuugaccaa cagagcagaa caugacagga uagccagaca guggaccaag 780
agauacgcaa cauaauucac aucauuugua ugcaguguga aggagcagaa ggccucuucc 840
cacugugcug cggaucuuua uagccuuuac aauacggacu ucugug 886
<210> 8
<211> 207
<212> PRT
<213> Mus musculus
<220>
<221> SOURCE
<222> 1..207
<223> /mol_type="protein"
/note="[CDS]:172..795 from SEQ ID NO 7"
/organism="Mus musculus"
<400> 8
Met Ser Ser Asp Arg Gln Arg Ser Asp Asp Glu Ser Pro Ser Thr Ser
1 5 10 15
Ser Gly Ser Ser Asp Ala Asp Gln Arg Asp Pro Ala Ala Pro Lys Pro
20 25 30
Glu Glu Gln Glu Glu Arg Lys Pro Ser Ala Thr Gln Gln Lys Lys Asn
35 40 45
Thr Lys Leu Ser Ser Lys Thr Thr Ala Lys Leu Ser Thr Ser Ala Lys
50 55 60
Arg Ile Gln Lys Glu Leu Ala Glu Ile Thr Leu Asp Pro Pro Pro Asn
65 70 75 80
Cys Ser Ala Gly Pro Lys Gly Asp Asn Ile Tyr Glu Trp Arg Ser Thr
85 90 95
Ile Leu Gly Pro Pro Gly Ser Val Tyr Glu Gly Gly Val Phe Phe Leu
100 105 110
Asp Ile Thr Phe Ser Ser Asp Tyr Pro Phe Lys Pro Pro Lys Val Thr
115 120 125
Phe Arg Thr Arg Ile Tyr His Cys Asn Ile Asn Ser Gln Gly Val Ile
130 135 140
Cys Leu Asp Ile Leu Lys Asp Asn Trp Ser Pro Ala Leu Thr Ile Ser
145 150 155 160
Lys Val Leu Leu Ser Ile Cys Ser Leu Leu Thr Asp Cys Asn Pro Ala
165 170 175
Asp Pro Leu Val Gly Ser Ile Ala Thr Gln Tyr Leu Thr Asn Arg Ala
180 185 190
Glu His Asp Arg Ile Ala Arg Gln Trp Thr Lys Arg Tyr Ala Thr
195 200 205