               SEQUENCE LISTING

<110> John, Smith

<120> Example of a Sequence Listing

<130> 11-00001

<140> EPT/EP2011/000001
<141> 2011-01-01

<150> US 0001/1
<151> 2010-03-17

<160> 8

<170> BiSSAP 1.0

<210> 1
<211> 227
<212> DNA
<213> Homo sapiens

<220> 
<221> source
<222> 1..227
<223> /mol_type="DNA"
      /organism="Homo sapiens"

<400> 1
atgttggggg cccgcctcag gctctgggtc tgtgccttgt gcagcgtctg cagcatgagc     60

gtcctcagag cctatcccaa tgcctcccca ctgctcggct ccagctgggg tggcctgatc    120

cacctgtaca cagccacagc caggaacagc taccacctgc agatccacaa gaatggccat    180

gtggatggcg caccccatca gaccatctac agtgccctga tgatcag                  227


<210> 2
<211> 70
<212> DNA
<213> Artificial Sequence

<220> 
<221> source
<222> 1..70
<223> /mol_type="DNA"
      /note="primer"
      /organism="Artificial Sequence"

<400> 2
ggggacaagt ttgtacaaaa aagcaggcta ggaggaatta accatgaaca gccaaatcac     60

caacgccaag                                                            70


<210> 3
<211> 240
<212> DNA
<213> Paramecium aurelia

<220> 
<221> source
<222> 1..240
<223> /mol_type="DNA"
      /organism="Paramecium aurelia"

<220> 
<221> CDS
<222> 52..123

<400> 3
agctgtagtc attcctgtgt cctcttctct ctgggcttct caccctgcta atcagatctc     60

agggagagtg tcttgaccct cctctgcctt tgcagcttca caggcaggca ggcaggcagc    120

tgatgtggca attgctggca gtgccacagg cttttcagcc aggcttaggg tgggtccgcc    180

gcggcgcggc ggcccctctc gcgctcctct cgcgcctctc tctcgctctc ctctcgctcg    240


<210> 4
<211> 23
<212> PRT
<213> Paramecium aurelia

<220> 
<221> SOURCE
<222> 1..23
<223> /mol_type="protein"
      /note="[CDS]:52..123 from SEQ ID NO 3"
      /organism="Paramecium aurelia"

<400> 4
Ser Asp Leu Arg Glu Ser Val Leu Thr Leu Leu Cys Leu Cys Ser Phe 
1               5                   10                   15    
Thr Gly Arg Gln Ala Gly Ser 
            20            

<210> 5
<400> 5
000

<210> 6
<211> 251
<212> PRT
<213> Homo sapiens

<220> 
<221> SOURCE
<222> 1..251
<223> /mol_type="protein"
      /organism="Homo sapiens"

<220> 
<221> VARIANT
<222> 64
<223> Val

<400> 6
Met Leu Gly Ala Arg Leu Arg Leu Trp Val Cys Ala Leu Cys Ser Val 
1               5                   10                   15    
Cys Ser Met Ser Val Leu Arg Ala Tyr Pro Asn Ala Ser Pro Leu Leu 
            20                   25                  30        
Gly Ser Ser Trp Gly Gly Leu Ile His Leu Tyr Thr Ala Thr Ala Arg 
        35                   40                  45            
Asn Ser Tyr His Leu Gln Ile His Lys Asn Gly His Val Asp Gly Ala 
    50                   55                  60                
Pro His Gln Thr Ile Tyr Ser Ala Leu Met Ile Arg Ser Glu Asp Ala 
65                   70                  75                  80
Gly Phe Val Val Ile Thr Gly Val Met Ser Arg Arg Tyr Leu Cys Met 
                85                   90                  95    
Asp Phe Arg Gly Asn Ile Phe Gly Ser His Tyr Phe Asp Pro Glu Asn 
            100                  105                110        
Cys Arg Phe Gln His Gln Thr Leu Glu Asn Gly Tyr Asp Val Tyr His 
        115                  120                125            
Ser Pro Gln Tyr His Phe Leu Val Ser Leu Gly Arg Ala Lys Arg Ala 
    130                  135                140                
Phe Leu Pro Gly Met Asn Pro Pro Pro Tyr Ser Gln Phe Leu Ser Arg 
145                  150                155                  160
Arg Asn Glu Ile Pro Leu Ile His Phe Asn Thr Pro Ile Pro Arg Arg 
                165                  170                175    
His Thr Arg Ser Ala Glu Asp Asp Ser Glu Arg Asp Pro Leu Asn Val 
            180                  185                190        
Leu Lys Pro Arg Ala Arg Met Thr Pro Ala Pro Ala Ser Cys Ser Gln 
        195                  200                205            
Glu Leu Pro Ser Ala Glu Asp Asn Ser Pro Met Ala Ser Asp Pro Leu 
    210                  215                220                
Gly Val Val Arg Gly Gly Arg Val Asn Thr His Ala Gly Gly Thr Gly 
225                  230                235                  240
Pro Glu Gly Cys Arg Pro Phe Ala Lys Phe Ile 
                245                  250    

<210> 7
<211> 886
<212> RNA
<213> Mus musculus

<220> 
<221> source
<222> 1..886
<223> /mol_type="RNA"
      /note="mRNA for ubiquitin conjugating enzyme (Ubc25 gene), Ubc252
      aallele"
      /organism="Mus musculus"

<220> 
<221> CDS
<222> 172..795
<223> /allele="Ubc252a"

<220> 
<221> variation
<222> 459
<223> /allele="Ubc252b"
      /frequency=".4"
      /replace="a"

<220> 
<221> variation
<222> 511..512
<223> /allele="Ubc252c"
      /replace="agctagcgagctagacgatcgatcggcgggggcctctatcgatt"

<220> 
<221> variation
<222> 790..798
<223> /replace=""
      /standard_name="Ubc252d variant"

<400> 7
gggccggagc cucggcggcg gcuucuuuuc ccgccccccc ggugcccccc ccaggcugcc      60

uccauuuccu caaggaaggu uccucggcgc ucucccuccc ccacagcgua gcggcgcacg     120

agcgggccgg gcgggcggcc gagaaguuuu cccagagaua aguucaccaa gauguccagu     180

gacaggcaaa ggucggauga ugagagcccu agcaccagca guggcaguuc agaugcagau     240

cagcgagacc cugccgcucc aaagcccgag gaacaggaag aaagaaaacc uucugccacc     300

cagcagaaga aaaacaccaa acucucuagc aaaacgacug cuaaguuauc cacuagugcu     360

aaaagaauuc agaaggagcu agcagagaua acccuugauc cuccuccuaa cugcagugcu     420

gggccuaaag gagauaacau uuaugaaugg aggucaacua uacuuggucc accagguucu     480

guauaugaag gugguguuuu uuuucuggau aucacauuuu cuucagauua uccauuuaag     540

ccaccaaagg uuacuuuccg uaccagaauc uaucacugca acaucaacag ucagggaguc     600

aucugccugg auauucugaa agacaacugg aguccugcuu ugacuauuuc aaagguuuug     660

cucucuauuu guucccuuuu gacagauugc aacccugcgg auccucuggu cggaagcaua     720

gccacucagu auuugaccaa cagagcagaa caugacagga uagccagaca guggaccaag     780

agauacgcaa cauaauucac aucauuugua ugcaguguga aggagcagaa ggccucuucc     840

cacugugcug cggaucuuua uagccuuuac aauacggacu ucugug                    886


<210> 8
<211> 207
<212> PRT
<213> Mus musculus

<220> 
<221> SOURCE
<222> 1..207
<223> /mol_type="protein"
      /note="[CDS]:172..795 from SEQ ID NO 7"
      /organism="Mus musculus"

<400> 8
Met Ser Ser Asp Arg Gln Arg Ser Asp Asp Glu Ser Pro Ser Thr Ser 
1               5                   10                   15    
Ser Gly Ser Ser Asp Ala Asp Gln Arg Asp Pro Ala Ala Pro Lys Pro 
            20                   25                  30        
Glu Glu Gln Glu Glu Arg Lys Pro Ser Ala Thr Gln Gln Lys Lys Asn 
        35                   40                  45            
Thr Lys Leu Ser Ser Lys Thr Thr Ala Lys Leu Ser Thr Ser Ala Lys 
    50                   55                  60                
Arg Ile Gln Lys Glu Leu Ala Glu Ile Thr Leu Asp Pro Pro Pro Asn 
65                   70                  75                  80
Cys Ser Ala Gly Pro Lys Gly Asp Asn Ile Tyr Glu Trp Arg Ser Thr 
                85                   90                  95    
Ile Leu Gly Pro Pro Gly Ser Val Tyr Glu Gly Gly Val Phe Phe Leu 
            100                  105                110        
Asp Ile Thr Phe Ser Ser Asp Tyr Pro Phe Lys Pro Pro Lys Val Thr 
        115                  120                125            
Phe Arg Thr Arg Ile Tyr His Cys Asn Ile Asn Ser Gln Gly Val Ile 
    130                  135                140                
Cys Leu Asp Ile Leu Lys Asp Asn Trp Ser Pro Ala Leu Thr Ile Ser 
145                  150                155                  160
Lys Val Leu Leu Ser Ile Cys Ser Leu Leu Thr Asp Cys Asn Pro Ala 
                165                  170                175    
Asp Pro Leu Val Gly Ser Ile Ala Thr Gln Tyr Leu Thr Asn Arg Ala 
            180                  185                190        
Glu His Asp Arg Ile Ala Arg Gln Trp Thr Lys Arg Tyr Ala Thr 
        195                  200                205        

